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TAF1A TATA-box binding protein associated factor, RNA polymerase I subunit A [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105301690, updated on 30-Mar-2024

Summary

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Gene symbol
TAF1A
Gene description
TATA-box binding protein associated factor, RNA polymerase I subunit A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889029.1 (735094..759725, complement)

NW_011889029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105301689 Neighboring gene uncharacterized LOC111729125 Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC111729124 Neighboring gene MIA SH3 domain ER export factor 3 Neighboring gene uncharacterized LOC111729123

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889029 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TATA box-binding protein-associated factor RNA polymerase I subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889029.1 Reference Pvam_2.0

    Range
    735094..759725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023520109.1 → XP_023375877.1  TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1

    UniProtKB/TrEMBL
    A0A6P6BLD0
    Conserved Domains (1) summary
    pfam14929
    Location:93 → 453
    TAF1_subA; TAF RNA Polymerase I subunit A

  2. XM_023520110.1 → XP_023375878.1  TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1

    UniProtKB/TrEMBL
    A0A6P6BLD0
    Conserved Domains (1) summary
    pfam14929
    Location:93 → 453
    TAF1_subA; TAF RNA Polymerase I subunit A

  3. XM_011374462.2 → XP_011372764.1  TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X2

    See identical proteins and their annotated locations for XP_011372764.1

    UniProtKB/TrEMBL
    A0A6P3REG6
    Conserved Domains (1) summary
    pfam14929
    Location:8 → 442
    TAF1_subA; TAF RNA Polymerase I subunit A

  4. XM_011374461.2 → XP_011372763.1  TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X2

    See identical proteins and their annotated locations for XP_011372763.1

    UniProtKB/TrEMBL
    A0A6P3REG6
    Conserved Domains (1) summary
    pfam14929
    Location:8 → 442
    TAF1_subA; TAF RNA Polymerase I subunit A

  5. XM_011374459.2 → XP_011372761.1  TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X2

    See identical proteins and their annotated locations for XP_011372761.1

    UniProtKB/TrEMBL
    A0A6P3REG6
    Conserved Domains (1) summary
    pfam14929
    Location:8 → 442
    TAF1_subA; TAF RNA Polymerase I subunit A

  6. XM_011374458.2 → XP_011372760.1  TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1

    UniProtKB/TrEMBL
    A0A6P6BLD0
    Conserved Domains (1) summary
    pfam14929
    Location:93 → 453
    TAF1_subA; TAF RNA Polymerase I subunit A

  7. XM_011374463.2 → XP_011372765.1  TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X3

    UniProtKB/TrEMBL
    A0A6P3QYW6
    Conserved Domains (1) summary
    pfam14929
    Location:38 → 398
    TAF1_subA; TAF RNA Polymerase I subunit A
Nucleotide Protein
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