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GPBP1L1 GC-rich promoter binding protein 1 like 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105297135, updated on 30-Mar-2024

Summary

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Gene symbol
GPBP1L1
Gene description
GC-rich promoter binding protein 1 like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888916.1 (2053895..2096681, complement)

NW_011888916.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L26-like Neighboring gene coiled-coil domain containing 17 Neighboring gene 5S ribosomal RNA Neighboring gene transmembrane protein 69 Neighboring gene intracisternal A particle-promoted polypeptide

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888916 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasculin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888916.1 Reference Pvam_2.0

    Range
    2053895..2096681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011367600.2 → XP_011365902.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_011365902.1

    UniProtKB/TrEMBL
    A0A6P3QKT6
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 437
    Vasculin; Vascular protein family Vasculin-like 1

  2. XM_011367603.2 → XP_011365905.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_011365905.1

    UniProtKB/TrEMBL
    A0A6P3QKT6
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 437
    Vasculin; Vascular protein family Vasculin-like 1

  3. XM_011367601.2 → XP_011365903.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_011365903.1

    UniProtKB/TrEMBL
    A0A6P3QKT6
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 437
    Vasculin; Vascular protein family Vasculin-like 1

  4. XM_011367604.2 → XP_011365906.1  vasculin-like protein 1

    See identical proteins and their annotated locations for XP_011365906.1

    UniProtKB/TrEMBL
    A0A6P3QKT6
    Conserved Domains (1) summary
    pfam15337
    Location:381 → 437
    Vasculin; Vascular protein family Vasculin-like 1
Nucleotide Protein
Heading Accession and Version

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