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cdk5 cyclin dependent kinase 5 [ Esox lucius (northern pike) ]

Gene ID: 105019653, updated on 12-Sep-2024

Summary

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Gene symbol
cdk5
Gene description
cyclin dependent kinase 5
See related
Ensembl:ENSELUG00000022250
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 3 NC_047571.1 (17195165..17203047, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG03 NC_025970.4 (19623534..19631412)

Chromosome 3 - NC_047571.1Genomic Context describing neighboring genes Neighboring gene H2B.K variant histone 1 Neighboring gene acid-sensing (proton-gated) ion channel 1c Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 8 Neighboring gene autophagy related 9B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent-like kinase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047571.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    17195165..17203047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010885998.3 → XP_010884300.1  cyclin-dependent-like kinase 5

    UniProtKB/TrEMBL
    A0A3P9AK11, A0A3P9AKV3
    Related
    ENSELUP00000041388.2, ENSELUT00000042659.3
    Conserved Domains (2) summary
    cd07839
    Location:3 → 286
    STKc_CDK5; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5
    PLN00009
    Location:1 → 288
    PLN00009; cyclin-dependent kinase A; Provisional
Nucleotide Protein
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Gene LinkOut

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