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rbm18 RNA binding motif protein 18 [ Esox lucius (northern pike) ]

Gene ID: 105014953, updated on 18-Jun-2024

Summary

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Gene symbol
rbm18
Gene description
RNA binding motif protein 18
See related
Ensembl:ENSELUG00000005876
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See rbm18 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 14 NC_047582.1 (6336009..6352565, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG14 NC_025981.4 (31020089..31035866)

Chromosome 14 - NC_047582.1Genomic Context describing neighboring genes Neighboring gene MORN repeat containing 5 Neighboring gene NADH:ubiquinone oxidoreductase subunit A8 Neighboring gene LIM homeobox 6a Neighboring gene mitochondrial ribosome recycling factor Neighboring gene annexin A3b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable RNA-binding protein 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047582.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    6336009..6352565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010877678.4 → XP_010875980.1  probable RNA-binding protein 18 isoform X2

    UniProtKB/TrEMBL
    A0A3P8XNI5
    Conserved Domains (2) summary
    COG0724
    Location:1 → 191
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12355
    Location:113 → 192
    RRM_RBM18; RNA recognition motif in eukaryotic RNA-binding protein 18 and similar proteins

  2. XM_010877677.4 → XP_010875979.1  probable RNA-binding protein 18 isoform X1

    Related
    ENSELUP00000004753.2, ENSELUT00000011814.3
    Conserved Domains (2) summary
    COG0724
    Location:1 → 191
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12355
    Location:113 → 192
    RRM_RBM18; RNA recognition motif in eukaryotic RNA-binding protein 18 and similar proteins
Nucleotide Protein
Heading Accession and Version

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