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DMTF1 cyclin D binding myb like transcription factor 1 [ Bison bison bison ]

Gene ID: 105002496, updated on 13-Mar-2024

Summary

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Gene symbol
DMTF1
Gene description
cyclin D binding myb like transcription factor 1
See related
Ensembl:ENSBBBG00000012608
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011495016.1 (913297..962705)

NW_011495016.1Genomic Context describing neighboring genes Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator family member 2 Neighboring gene methylosome protein 50 pseudogene Neighboring gene U4/U6 small nuclear ribonucleoprotein Prp4-like Neighboring gene transmembrane protein 243 Neighboring gene nucleophosmin pseudogene Neighboring gene carnitine O-octanoyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011495016.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-D-binding Myb-like transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011495016.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    913297..962705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010859127.1 → XP_010857429.1  cyclin-D-binding Myb-like transcription factor 1 isoform X1

    See identical proteins and their annotated locations for XP_010857429.1

    UniProtKB/TrEMBL
    A0A6P3IYL2
    Conserved Domains (3) summary
    pfam00249
    Location:274 → 329
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam13921
    Location:228 → 284
    Myb_DNA-bind_6; Myb-like DNA-binding domain
    cl28544
    Location:105 → 438
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

  2. XM_010859131.1 → XP_010857433.1  cyclin-D-binding Myb-like transcription factor 1 isoform X3

    See identical proteins and their annotated locations for XP_010857433.1

    UniProtKB/TrEMBL
    A0A6P3ISX7
    Conserved Domains (4) summary
    smart00717
    Location:274 → 330
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd00167
    Location:338 → 388
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    pfam00249
    Location:274 → 329
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam13921
    Location:228 → 284
    Myb_DNA-bind_6; Myb-like DNA-binding domain

  3. XM_010859130.1 → XP_010857432.1  cyclin-D-binding Myb-like transcription factor 1 isoform X2

    See identical proteins and their annotated locations for XP_010857432.1

    UniProtKB/TrEMBL
    A0A6P3J1C5
    Related
    ENSBBBP00000019253.1, ENSBBBT00000009888.1
    Conserved Domains (3) summary
    pfam00249
    Location:274 → 329
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam13921
    Location:228 → 284
    Myb_DNA-bind_6; Myb-like DNA-binding domain
    cl28544
    Location:105 → 378
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

  4. XM_010859128.1 → XP_010857430.1  cyclin-D-binding Myb-like transcription factor 1 isoform X1

    See identical proteins and their annotated locations for XP_010857430.1

    UniProtKB/TrEMBL
    A0A6P3IYL2
    Conserved Domains (3) summary
    pfam00249
    Location:274 → 329
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam13921
    Location:228 → 284
    Myb_DNA-bind_6; Myb-like DNA-binding domain
    cl28544
    Location:105 → 438
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

  5. XM_010859129.1 → XP_010857431.1  cyclin-D-binding Myb-like transcription factor 1 isoform X1

    See identical proteins and their annotated locations for XP_010857431.1

    UniProtKB/TrEMBL
    A0A6P3IYL2
    Related
    ENSBBBP00000003486.1, ENSBBBT00000009885.1
    Conserved Domains (3) summary
    pfam00249
    Location:274 → 329
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam13921
    Location:228 → 284
    Myb_DNA-bind_6; Myb-like DNA-binding domain
    cl28544
    Location:105 → 438
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Nucleotide Protein
Heading Accession and Version

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