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MYB MYB proto-oncogene, transcription factor [ Bison bison bison ]

Gene ID: 104991680, updated on 12-Mar-2024

Summary

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Gene symbol
MYB
Gene description
MYB proto-oncogene, transcription factor
See related
Ensembl:ENSBBBG00000000167
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494770.1 (5824852..5859046, complement)

NW_011494770.1Genomic Context describing neighboring genes Neighboring gene Abelson helper integration site 1 Neighboring gene cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial-like Neighboring gene cleavage stimulation factor subunit 3 pseudogene Neighboring gene HBS1 like translational GTPase Neighboring gene aldehyde dehydrogenase 8 family member A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494770.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional activator Myb

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494770.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    5824852..5859046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010844255.1 → XP_010842557.1  transcriptional activator Myb isoform X4

    UniProtKB/TrEMBL
    A0A6P3HTA5
    Related
    ENSBBBP00000016229.1, ENSBBBT00000027803.1
    Conserved Domains (4) summary
    smart00717
    Location:72 → 120
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:72 → 118
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:249 → 293
    LMSTEN; LMSTEN motif
    pfam09316
    Location:297 → 457
    Cmyb_C; C-myb, C-terminal

  2. XM_010844252.1 → XP_010842554.1  transcriptional activator Myb isoform X1

    See identical proteins and their annotated locations for XP_010842554.1

    UniProtKB/TrEMBL
    A0A6P3HJM6
    Conserved Domains (4) summary
    pfam00249
    Location:20 → 66
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:249 → 293
    LMSTEN; LMSTEN motif
    pfam09316
    Location:498 → 664
    Cmyb_C; C-myb, C-terminal
    cl28544
    Location:69 → 182
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

  3. XM_010844250.1 → XP_010842552.1  transcriptional activator Myb isoform X1

    See identical proteins and their annotated locations for XP_010842552.1

    UniProtKB/TrEMBL
    A0A6P3HJM6
    Related
    ENSBBBP00000016237.1, ENSBBBT00000027821.1
    Conserved Domains (4) summary
    pfam00249
    Location:20 → 66
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:249 → 293
    LMSTEN; LMSTEN motif
    pfam09316
    Location:498 → 664
    Cmyb_C; C-myb, C-terminal
    cl28544
    Location:69 → 182
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

  4. XM_010844253.1 → XP_010842555.1  transcriptional activator Myb isoform X2

    UniProtKB/TrEMBL
    A0A6P3HVF3
    Conserved Domains (5) summary
    smart00717
    Location:48 → 96
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:48 → 94
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:225 → 269
    LMSTEN; LMSTEN motif
    pfam09316
    Location:474 → 639
    Cmyb_C; C-myb, C-terminal
    cl21498
    Location:28 → 59
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

  5. XM_010844254.1 → XP_010842556.1  transcriptional activator Myb isoform X3

    UniProtKB/TrEMBL
    A0A6P3HJN1
    Related
    ENSBBBP00000027769.1, ENSBBBT00000027813.1
    Conserved Domains (4) summary
    smart00717
    Location:72 → 120
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:72 → 118
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:249 → 293
    LMSTEN; LMSTEN motif
    pfam09316
    Location:381 → 542
    Cmyb_C; C-myb, C-terminal

  6. XM_010844249.1 → XP_010842551.1  transcriptional activator Myb isoform X1

    See identical proteins and their annotated locations for XP_010842551.1

    UniProtKB/TrEMBL
    A0A6P3HJM6
    Conserved Domains (4) summary
    pfam00249
    Location:20 → 66
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:249 → 293
    LMSTEN; LMSTEN motif
    pfam09316
    Location:498 → 664
    Cmyb_C; C-myb, C-terminal
    cl28544
    Location:69 → 182
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Nucleotide Protein
Heading Accession and Version

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