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BECN1 beclin 1 [ Bison bison bison ]

Gene ID: 104990423, updated on 12-Mar-2024

Summary

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Gene symbol
BECN1
Gene description
beclin 1
See related
Ensembl:ENSBBBG00000011400
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494752.1 (398040..409123)

NW_011494752.1Genomic Context describing neighboring genes Neighboring gene membrane primary amine oxidase Neighboring gene primary amine oxidase, lung isozyme-like Neighboring gene proteasome activator subunit 3 Neighboring gene cyclin N-terminal domain containing 1 Neighboring gene cytochrome c oxidase assembly factor 3 homolog, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494752.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type I IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beclin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494752.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    398040..409123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010842495.1 → XP_010840797.1  beclin-1

    UniProtKB/TrEMBL
    A0A6P3HN03
    Related
    ENSBBBP00000018462.1, ENSBBBT00000012183.1
    Conserved Domains (3) summary
    pfam04111
    Location:133 → 444
    APG6; Autophagy protein Apg6
    pfam12777
    Location:194 → 267
    MT; Microtubule-binding stalk of dynein motor
    pfam15285
    Location:105 → 127
    BH3; Beclin-1 BH3 domain, Bcl-2-interacting
Nucleotide Protein
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