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DZIP3 DAZ interacting zinc finger protein 3 [ Bison bison bison ]

Gene ID: 104987557, updated on 12-Mar-2024

Summary

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Gene symbol
DZIP3
Gene description
DAZ interacting zinc finger protein 3
See related
Ensembl:ENSBBBG00000011967
Gene type
protein coding
RefSeq status
MODEL
Organism
Bison bison bison (sub-species: bison)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
38
Annotation release Status Assembly Chr Location
100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494670.1 (5110379..5255082)

NW_011494670.1Genomic Context describing neighboring genes Neighboring gene HHLA2 member of B7 family Neighboring gene myosin heavy chain 15 Neighboring gene kinesin-like protein KIFC1 pseudogene Neighboring gene cellular inhibitor of PP2A Neighboring gene natural resistance-associated macrophage protein 2 pseudogene Neighboring gene T-cell receptor-associated transmembrane adapter 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011494670.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase DZIP3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bison_UMD1.0 Primary Assembly

Genomic

  1. NW_011494670.1 Reference Bison_UMD1.0 Primary Assembly

    Range
    5110379..5255082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010838572.1 → XP_010836874.1  E3 ubiquitin-protein ligase DZIP3 isoform X1

    See identical proteins and their annotated locations for XP_010836874.1

    UniProtKB/TrEMBL
    A0A6P3H489
    Conserved Domains (2) summary
    pfam12678
    Location:1139 → 1185
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:1145 → 1185
    zf-RING_2; Ring finger domain

  2. XM_010838579.1 → XP_010836881.1  E3 ubiquitin-protein ligase DZIP3 isoform X5

    UniProtKB/TrEMBL
    A0A6P3H494
    Conserved Domains (2) summary
    pfam12678
    Location:950 → 996
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:956 → 996
    zf-RING_2; Ring finger domain

  3. XM_010838580.1 → XP_010836882.1  E3 ubiquitin-protein ligase DZIP3 isoform X6

    UniProtKB/TrEMBL
    A0A6P3HC30
    Conserved Domains (2) summary
    pfam12678
    Location:933 → 979
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:939 → 979
    zf-RING_2; Ring finger domain

  4. XM_010838575.1 → XP_010836877.1  E3 ubiquitin-protein ligase DZIP3 isoform X2

    UniProtKB/TrEMBL
    A0A6P3HC23
    Conserved Domains (1) summary
    TIGR02168
    Location:754 → 938
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  5. XM_010838570.1 → XP_010836872.1  E3 ubiquitin-protein ligase DZIP3 isoform X1

    See identical proteins and their annotated locations for XP_010836872.1

    UniProtKB/TrEMBL
    A0A6P3H489
    Conserved Domains (2) summary
    pfam12678
    Location:1139 → 1185
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:1145 → 1185
    zf-RING_2; Ring finger domain

  6. XM_010838577.1 → XP_010836879.1  E3 ubiquitin-protein ligase DZIP3 isoform X3

    UniProtKB/TrEMBL
    A0A6P3HCM8
    Conserved Domains (2) summary
    pfam12678
    Location:1075 → 1121
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:1081 → 1121
    zf-RING_2; Ring finger domain

  7. XM_010838578.1 → XP_010836880.1  E3 ubiquitin-protein ligase DZIP3 isoform X4

    UniProtKB/TrEMBL
    A0A6P3HE71
    Conserved Domains (2) summary
    pfam12678
    Location:1041 → 1087
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:1047 → 1087
    zf-RING_2; Ring finger domain

  8. XM_010838571.1 → XP_010836873.1  E3 ubiquitin-protein ligase DZIP3 isoform X1

    See identical proteins and their annotated locations for XP_010836873.1

    UniProtKB/TrEMBL
    A0A6P3H489
    Conserved Domains (2) summary
    pfam12678
    Location:1139 → 1185
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:1145 → 1185
    zf-RING_2; Ring finger domain

  9. XM_010838573.1 → XP_010836875.1  E3 ubiquitin-protein ligase DZIP3 isoform X1

    See identical proteins and their annotated locations for XP_010836875.1

    UniProtKB/TrEMBL
    A0A6P3H489
    Conserved Domains (2) summary
    pfam12678
    Location:1139 → 1185
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:1145 → 1185
    zf-RING_2; Ring finger domain

  10. XM_010838574.1 → XP_010836876.1  E3 ubiquitin-protein ligase DZIP3 isoform X1

    See identical proteins and their annotated locations for XP_010836876.1

    UniProtKB/TrEMBL
    A0A6P3H489
    Related
    ENSBBBP00000002857.1, ENSBBBT00000011074.1
    Conserved Domains (2) summary
    pfam12678
    Location:1139 → 1185
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:1145 → 1185
    zf-RING_2; Ring finger domain

  11. XM_010838581.1 → XP_010836883.1  E3 ubiquitin-protein ligase DZIP3 isoform X7

    UniProtKB/TrEMBL
    A0A6P3GZX5
    Conserved Domains (2) summary
    pfam12678
    Location:912 → 958
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:918 → 958
    zf-RING_2; Ring finger domain
Nucleotide Protein
Heading Accession and Version

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