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Tox thymocyte selection associated high mobility group box [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104873762, updated on 12-Mar-2024

Summary

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Gene symbol
Tox
Gene description
thymocyte selection associated high mobility group box
Locus tag
H920_01224
See related
Ensembl:ENSFDAG00000017305
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900917.1 (51302180..51610582)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011043537.1 (2753231..3061274)

NW_022900917.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104873756 Neighboring gene U2 spliceosomal RNA Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC104873768 Neighboring gene neutral sphingomyelinase activation associated factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in leukocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thymocyte selection-associated high mobility group box protein TOX
Names
Thymocyte selection-associated high mobility group box protein TOX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900917.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    51302180..51610582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010640588.3 → XP_010638890.1  thymocyte selection-associated high mobility group box protein TOX

    UniProtKB/TrEMBL
    A0A091ENX9
    Related
    ENSFDAP00000009272.1
    Conserved Domains (1) summary
    cd00084
    Location:261 → 310
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
Nucleotide Protein
Heading Accession and Version

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