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Sugt1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104871121, updated on 12-Mar-2024

Summary

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Gene symbol
Sugt1
Gene description
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
Locus tag
H920_10696
See related
Ensembl:ENSFDAG00000007175
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900950.1 (55042489..55077193)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011045458.1 (98060..132780)

NW_022900950.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104865449 Neighboring gene uncharacterized LOC104865450 Neighboring gene E74 like ETS transcription factor 1 Neighboring gene chondromodulin Neighboring gene protocadherin 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SGT1 homolog
Names
Suppressor of G2 allele of SKP1 like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900950.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    55042489..55077193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033759895.1 → XP_033615786.1  protein SGT1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A091D9Y5
    Conserved Domains (2) summary
    PLN03088
    Location:23 → 335
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:44 → 74
    TPR; TPR repeat [structural motif]

  2. XM_010636933.3 → XP_010635235.1  protein SGT1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A091D9Y5
    Related
    ENSFDAP00000022173.1
    Conserved Domains (4) summary
    cd06489
    Location:142 → 225
    p23_CS_hSgt1_like; p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins. hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the ...
    PLN03088
    Location:23 → 332
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:44 → 74
    TPR; TPR repeat [structural motif]
    pfam05002
    Location:252 → 332
    SGS; SGS domain
Nucleotide Protein
Heading Accession and Version

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