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Rai14 retinoic acid induced 14 [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104849141, updated on 12-Mar-2024

Summary

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Gene symbol
Rai14
Gene description
retinoic acid induced 14
See related
Ensembl:ENSFDAG00000008611
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900913.1 (26665012..26788822)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046431.1 (496648..620456)

NW_022900913.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104849139 Neighboring gene C1q and TNF related 3 Neighboring gene small nucleolar RNA SNORD50 Neighboring gene uncharacterized LOC104849140 Neighboring gene tetratricopeptide repeat domain 23 like Neighboring gene RAD1 checkpoint DNA exonuclease

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankycorbin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900913.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    26665012..26788822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010605434.3 → XP_010603736.1  ankycorbin isoform X2

    Conserved Domains (5) summary
    cd00204
    Location:81 → 205
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:90 → 182
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:171 → 224
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:118 → 149
    ANK; ANK repeat [structural motif]
    cl19219
    Location:592 → 657
    DUF342; Protein of unknown function (DUF342)

  2. XM_010605433.3 → XP_010603735.1  ankycorbin isoform X1

    Related
    ENSFDAP00000020212.1
    Conserved Domains (5) summary
    cd00204
    Location:87 → 211
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:96 → 188
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:177 → 230
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:92 → 122
    ANK; ANK repeat [structural motif]
    cl19219
    Location:598 → 663
    DUF342; Protein of unknown function (DUF342)

  3. XM_010605435.3 → XP_010603737.1  ankycorbin isoform X3

    Conserved Domains (5) summary
    cd00204
    Location:87 → 211
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:96 → 188
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:177 → 230
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:124 → 155
    ANK; ANK repeat [structural motif]
    cl19219
    Location:569 → 634
    DUF342; Protein of unknown function (DUF342)
Nucleotide Protein
Heading Accession and Version

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