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NFYA nuclear transcription factor Y subunit alpha [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104570754, updated on 12-Mar-2024

Summary

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Gene symbol
NFYA
Gene description
nuclear transcription factor Y subunit alpha
Locus tag
N309_03227
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010583650.1 (142934..151322, complement)

NW_010583650.1Genomic Context describing neighboring genes Neighboring gene triggering receptor expressed on myeloid cells 2-like Neighboring gene uncharacterized LOC104570761 Neighboring gene O-acyl-ADP-ribose deacylase 1 Neighboring gene apolipoprotein B mRNA editing enzyme catalytic subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010583650.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010583650.1 Reference ASM70537v2

    Range
    142934..151322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010217792.1 → XP_010216094.1  nuclear transcription factor Y subunit alpha isoform X3

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:263 → 317
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  2. XM_010217791.1 → XP_010216093.1  nuclear transcription factor Y subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:263 → 317
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  3. XM_010217797.1 → XP_010216099.1  nuclear transcription factor Y subunit alpha isoform X8

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:220 → 274
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  4. XM_010217794.1 → XP_010216096.1  nuclear transcription factor Y subunit alpha isoform X5

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:258 → 312
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  5. XM_010217793.1 → XP_010216095.1  nuclear transcription factor Y subunit alpha isoform X4

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:262 → 316
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  6. XM_010217790.1 → XP_010216092.1  nuclear transcription factor Y subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:264 → 318
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  7. XM_010217798.1 → XP_010216100.1  nuclear transcription factor Y subunit alpha isoform X9

    Conserved Domains (1) summary
    pfam02045
    Location:191 → 245
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  8. XM_010217796.1 → XP_010216098.1  nuclear transcription factor Y subunit alpha isoform X7

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:229 → 283
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  9. XM_010217795.1 → XP_010216097.1  nuclear transcription factor Y subunit alpha isoform X6

    UniProtKB/TrEMBL
    A0A099ZAF0
    Conserved Domains (1) summary
    pfam02045
    Location:235 → 289
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
Nucleotide Protein
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