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PPARG peroxisome proliferator activated receptor gamma [ Buceros rhinoceros silvestris ]

Gene ID: 104489483, updated on 3-Aug-2024

Summary

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Gene symbol
PPARG
Gene description
peroxisome proliferator activated receptor gamma
Locus tag
N320_05829
Gene type
protein coding
RefSeq status
MODEL
Organism
Buceros rhinoceros silvestris (sub-species: silvestris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Bucerotidae; Buceros
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM71030v1 (GCF_000710305.1) Unplaced Scaffold NW_010399842.1 (32329..54592)

NW_010399842.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010399842.1 Unplaced Scaffold Reference ASM71030v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome proliferator-activated receptor gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Buceros rhinoceros silvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM71030v1

Genomic

  1. NW_010399842.1 Reference ASM71030v1

    Range
    32329..54592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010131646.1 → XP_010129948.1  peroxisome proliferator-activated receptor gamma

    UniProtKB/TrEMBL
    A0A091GTQ3
    Conserved Domains (3) summary
    cd06932
    Location:207 → 474
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:108 → 191
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers
    pfam12577
    Location:1 → 78
    PPARgamma_N; PPAR gamma N-terminal region
Nucleotide Protein
Heading Accession and Version

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