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RPA1 replication protein A1 [ Chlamydotis macqueenii (Macqueen's bustard) ]

Gene ID: 104476180, updated on 3-Aug-2024

Summary

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Gene symbol
RPA1
Gene description
replication protein A1
Locus tag
N324_07995
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlamydotis macqueenii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Chlamydotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM69519v1 (GCF_000695195.1) Unplaced Scaffold NW_010463184.1 (142..21674)

NW_010463184.1Genomic Context describing neighboring genes Neighboring gene reticulon 4 receptor like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010463184.1 Unplaced Scaffold Reference ASM69519v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA unwinding involved in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance via telomerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication factor A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
replication protein A 70 kDa DNA-binding subunit
Names
Replication protein A 70 kDa DNA-binding subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlamydotis macqueenii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69519v1

Genomic

  1. NW_010463184.1 Reference ASM69519v1

    Range
    142..21674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010115893.1 → XP_010114195.1  replication protein A 70 kDa DNA-binding subunit

    UniProtKB/TrEMBL
    A0A091KKR4
    Conserved Domains (5) summary
    cd04474
    Location:170 → 272
    RPA1_DBD_A; RPA1_DBD_A: A subfamily of OB folds corresponding to the second OB fold, the ssDNA-binding domain (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the large subunit of Replication protein A (RPA). RPA is a nuclear ssDNA-binding protein (SSB) which ...
    TIGR00617
    Location:3 → 596
    rpa1; replication factor-a protein 1 (rpa1)
    pfam08646
    Location:445 → 590
    Rep_fac-A_C; Replication factor-A C terminal domain
    pfam16900
    Location:289 → 373
    REPA_OB_2; Replication protein A OB domain
    cl09930
    Location:3 → 89
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Nucleotide Protein
Heading Accession and Version

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