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SGTA small glutamine rich tetratricopeptide repeat co-chaperone alpha [ Chaetura pelagica (chimney swift) ]

Gene ID: 104395608, updated on 3-Aug-2024

Summary

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Gene symbol
SGTA
Gene description
small glutamine rich tetratricopeptide repeat co-chaperone alpha
Locus tag
M959_14663
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009954561.1 (14614..22400, complement)

NW_009954561.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 39 member 3 Neighboring gene thimet oligopeptidase 1 Neighboring gene proprotein convertase subtilisin/kexin type 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009954561.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein targeting to endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small glutamine-rich tetratricopeptide repeat-containing protein alpha
Names
Small glutamine-rich tetratricopeptide repeat-containing protein alpha
small glutamine rich tetratricopeptide repeat containing alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009954561.1 Reference ChaPel_1.0

    Range
    14614..22400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010005322.1 → XP_010003624.1  small glutamine-rich tetratricopeptide repeat-containing protein alpha

    See identical proteins and their annotated locations for XP_010003624.1

    UniProtKB/TrEMBL
    A0A093BT48
    Conserved Domains (4) summary
    sd00006
    Location:90 → 118
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:158 → 191
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:89 → 155
    TPR_11; TPR repeat
    pfam16546
    Location:6 → 64
    SGTA_dimer; Homodimerization domain of SGTA
Nucleotide Protein
Heading Accession and Version

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