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TSPAN18 tetraspanin 18 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104390391, updated on 3-Aug-2024

Summary

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Gene symbol
TSPAN18
Gene description
tetraspanin 18
Locus tag
M959_11639
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953571.1 (1843051..1864784)

NW_009953571.1Genomic Context describing neighboring genes Neighboring gene ALX homeobox 4 Neighboring gene CD82 molecule Neighboring gene tumor protein p53 inducible protein 11 Neighboring gene PR/SET domain 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953571.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-18
Names
Tetraspanin-18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953571.1 Reference ChaPel_1.0

    Range
    1843051..1864784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009999504.1 → XP_009997806.1  tetraspanin-18

    See identical proteins and their annotated locations for XP_009997806.1

    Conserved Domains (2) summary
    cd03156
    Location:105 → 217
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:8 → 246
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

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