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MED16 mediator complex subunit 16 [ Tyto alba (common barn owl) ]

Gene ID: 104366827, updated on 3-Aug-2024

Summary

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Gene symbol
MED16
Gene description
mediator complex subunit 16
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881293.1 (10093044..10102781, complement)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009975659.1 (2126..10365, complement)

NW_024881293.1Genomic Context describing neighboring genes Neighboring gene phospholipid phosphatase related 3 Neighboring gene complement factor D Neighboring gene U6 spliceosomal RNA Neighboring gene R3H domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881293.1 Reference T.alba_DEE_v4.0

    Range
    10093044..10102781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042794365.1 → XP_042650299.1  mediator of RNA polymerase II transcription subunit 16

    Conserved Domains (3) summary
    smart00320
    Location:67 → 97
    WD40; WD40 repeats
    sd00039
    Location:23 → 68
    7WD40; WD40 repeat [structural motif]
    pfam11635
    Location:108 → 823
    Med16; Mediator complex subunit 16

  2. XM_032993442.2 → XP_032849333.2  mediator of RNA polymerase II transcription subunit 16

    Conserved Domains (3) summary
    smart00320
    Location:67 → 97
    WD40; WD40 repeats
    sd00039
    Location:23 → 68
    7WD40; WD40 repeat [structural motif]
    pfam11635
    Location:108 → 823
    Med16; Mediator complex subunit 16

  3. XM_032993441.2 → XP_032849332.2  mediator of RNA polymerase II transcription subunit 16

    Conserved Domains (3) summary
    smart00320
    Location:67 → 97
    WD40; WD40 repeats
    sd00039
    Location:23 → 68
    7WD40; WD40 repeat [structural motif]
    pfam11635
    Location:108 → 823
    Med16; Mediator complex subunit 16

  4. XM_032993443.2 → XP_032849334.2  mediator of RNA polymerase II transcription subunit 16

    Conserved Domains (3) summary
    smart00320
    Location:67 → 97
    WD40; WD40 repeats
    sd00039
    Location:23 → 68
    7WD40; WD40 repeat [structural motif]
    pfam11635
    Location:108 → 823
    Med16; Mediator complex subunit 16
Nucleotide Protein
Heading Accession and Version

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