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RAD51 RAD51 recombinase [ Charadrius vociferus (killdeer) ]

Gene ID: 104292987, updated on 3-Aug-2024

Summary

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Gene symbol
RAD51
Gene description
RAD51 recombinase
Locus tag
N301_00449
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See RAD51 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009650167.1 (232970..242193, complement)

NW_009650167.1Genomic Context describing neighboring genes Neighboring gene GTP cyclohydrolase I feedback regulator Neighboring gene regulator of microtubule dynamics 3 Neighboring gene kinetochore scaffold 1 Neighboring gene RNA pseudouridine synthase domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009650167.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA strand exchange activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA recombinase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA strand invasion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromosome organization involved in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination-dependent replication fork processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in condensed nuclear chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein RAD51 homolog 1
Names
DNA repair protein RAD51 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009650167.1 Reference ASM70802v2

    Range
    232970..242193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009892420.1 → XP_009890722.1  DNA repair protein RAD51 homolog 1 isoform X1

    See identical proteins and their annotated locations for XP_009890722.1

    UniProtKB/TrEMBL
    A0A0A0AZ45
    Conserved Domains (3) summary
    cd01123
    Location:102 → 335
    Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...
    TIGR02239
    Location:25 → 339
    recomb_RAD51; DNA repair protein RAD51
    pfam14520
    Location:32 → 80
    HHH_5; Helix-hairpin-helix domain

  2. XM_009892421.1 → XP_009890723.1  DNA repair protein RAD51 homolog 1 isoform X2

    Conserved Domains (2) summary
    cd01123
    Location:102 → 258
    Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...
    pfam14520
    Location:32 → 80
    HHH_5; Helix-hairpin-helix domain
Nucleotide Protein
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