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DMTF1 cyclin D binding myb like transcription factor 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104284585, updated on 3-Aug-2024

Summary

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Gene symbol
DMTF1
Gene description
cyclin D binding myb like transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See DMTF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647856.1 (5630030..5655697)

NW_009647856.1Genomic Context describing neighboring genes Neighboring gene glutamate metabotropic receptor 3 Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator family member 2 Neighboring gene DNA cross-link repair 1C Neighboring gene meiosis/spermiogenesis associated 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647856.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cyclin-D-binding Myb-like transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647856.1 Reference ASM70802v2

    Range
    5630030..5655697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009882934.1 → XP_009881236.1  LOW QUALITY PROTEIN: cyclin-D-binding Myb-like transcription factor 1

    Conserved Domains (4) summary
    smart00717
    Location:300 → 356
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd00167
    Location:364 → 414
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    pfam00249
    Location:300 → 355
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam13921
    Location:254 → 310
    Myb_DNA-bind_6; Myb-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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