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LONRF1 LON peptidase N-terminal domain and ring finger 1 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104280920, updated on 3-Aug-2024

Summary

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Gene symbol
LONRF1
Gene description
LON peptidase N-terminal domain and ring finger 1
Locus tag
N311_08621
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009700370.1 (4810..14807)

NW_009700370.1Genomic Context describing neighboring genes Neighboring gene multifunctional protein ADE2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009700370.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LON peptidase N-terminal domain and RING finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009700370.1 Reference ASM70340v1

    Range
    4810..14807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009878729.1 → XP_009877031.1  LON peptidase N-terminal domain and RING finger protein 1

    UniProtKB/TrEMBL
    A0A091N2D2
    Conserved Domains (5) summary
    cd00162
    Location:236 → 278
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cl19481
    Location:322 → 523
    LON; Found in ATP-dependent protease La (LON)
    sd00006
    Location:6 → 36
    TPR; TPR repeat [structural motif]
    pfam02190
    Location:325 → 523
    LON_substr_bdg; ATP-dependent protease La (LON) substrate-binding domain
    pfam13432
    Location:13 → 73
    TPR_16; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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