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TSPAN18 tetraspanin 18 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104280781, updated on 3-Aug-2024

Summary

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Gene symbol
TSPAN18
Gene description
tetraspanin 18
Locus tag
N311_03396
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009699788.1 (9761..24335)

NW_009699788.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009699788.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-18
Names
Tetraspanin-18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009699788.1 Reference ASM70340v1

    Range
    9761..24335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009878546.1 → XP_009876848.1  tetraspanin-18

    UniProtKB/TrEMBL
    A0A091N1W9
    Conserved Domains (2) summary
    cd03156
    Location:105 → 217
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:8 → 237
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

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