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FASN fatty acid synthase [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104276273, updated on 3-Aug-2024

Summary

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Gene symbol
FASN
Gene description
fatty acid synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
42
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009724505.1 (3389..39005, complement)

NW_009724505.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009724505.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009724505.1 Reference ASM70340v1

    Range
    3389..39005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009872527.1 → XP_009870829.1  fatty acid synthase

    Conserved Domains (12) summary
    cd05195
    Location:1569 → 1858
    enoyl_red; enoyl reductase of polyketide synthase
    cd08954
    Location:1880 → 2116
    KR_1_FAS_SDR_x; beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs
    smart00823
    Location:2115 → 2183
    PKS_PP; Phosphopantetheine attachment site
    smart00825
    Location:4 → 404
    PKS_KS; Beta-ketoacyl synthase
    smart00829
    Location:1568 → 1858
    PKS_ER; Enoylreductase
    cd00833
    Location:2 → 404
    PKS; polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or ...
    TIGR02072
    Location:1238 → 1389
    BioC; malonyl-acyl carrier protein O-methyltransferase BioC
    pfam00698
    Location:492 → 809
    Acyl_transf_1; Acyl transferase domain
    pfam00975
    Location:2243 → 2502
    Thioesterase; Thioesterase domain
    pfam16197
    Location:362 → 473
    KAsynt_C_assoc; Ketoacyl-synthetase C-terminal extension
    cl00509
    Location:874 → 1108
    hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
    cl21454
    Location:1329 → 1553
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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