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ITGB1BP1 integrin subunit beta 1 binding protein 1 [ Egretta garzetta (little egret) ]

Gene ID: 104127157, updated on 3-Aug-2024

Summary

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Gene symbol
ITGB1BP1
Gene description
integrin subunit beta 1 binding protein 1
Locus tag
Z169_02343
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259798.1 (1268041..1276558, complement)

NW_009259798.1Genomic Context describing neighboring genes Neighboring gene membrane bound O-acyltransferase domain containing 2 Neighboring gene ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 Neighboring gene cleavage and polyadenylation specific factor 3 Neighboring gene isoamyl acetate hydrolyzing esterase 1 (putative)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259798 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of focal adhesion assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-1-binding protein 1
Names
Integrin beta-1-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259798.1 Reference ASM68718v1 Primary Assembly

    Range
    1268041..1276558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035895327.1 → XP_035751220.1  integrin beta-1-binding protein 1 isoform X3

    Conserved Domains (1) summary
    cl17171
    Location:1 → 149
    PH-like; Pleckstrin homology-like domain

  2. XM_009639800.2 → XP_009638095.1  integrin beta-1-binding protein 1 isoform X2

    See identical proteins and their annotated locations for XP_009638095.1

    UniProtKB/TrEMBL
    A0A091J6W6
    Conserved Domains (1) summary
    cl17171
    Location:1 → 199
    PH-like; Pleckstrin homology-like domain

  3. XM_009639799.2 → XP_009638094.1  integrin beta-1-binding protein 1 isoform X1

    See identical proteins and their annotated locations for XP_009638094.1

    Conserved Domains (1) summary
    cl17171
    Location:1 → 207
    PH-like; Pleckstrin homology-like domain

  4. XM_035895326.1 → XP_035751219.1  integrin beta-1-binding protein 1 isoform X1

    Conserved Domains (1) summary
    cl17171
    Location:1 → 207
    PH-like; Pleckstrin homology-like domain

  5. XM_035895325.1 → XP_035751218.1  integrin beta-1-binding protein 1 isoform X1

    Conserved Domains (1) summary
    cl17171
    Location:1 → 207
    PH-like; Pleckstrin homology-like domain

  6. XM_035895328.1 → XP_035751221.1  integrin beta-1-binding protein 1 isoform X4

    Conserved Domains (1) summary
    cl17171
    Location:1 → 88
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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