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SAP30 Sin3A associated protein 30 [ Fulmarus glacialis (Northern fulmar) ]

Gene ID: 104079392, updated on 3-Aug-2024

Summary

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Gene symbol
SAP30
Gene description
Sin3A associated protein 30
Locus tag
N327_06408
Gene type
protein coding
RefSeq status
MODEL
Organism
Fulmarus glacialis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Fulmarus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM69083v1 (GCF_000690835.1) Unplaced Scaffold NW_009222402.1 (599..5887)

NW_009222402.1Genomic Context describing neighboring genes Neighboring gene stimulator of chondrogenesis 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009222402.1 Unplaced Scaffold Reference ASM69083v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP30
Names
Histone deacetylase complex subunit SAP30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fulmarus glacialis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69083v1

Genomic

  1. NW_009222402.1 Reference ASM69083v1

    Range
    599..5887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009581424.1 → XP_009579719.1  histone deacetylase complex subunit SAP30

    See identical proteins and their annotated locations for XP_009579719.1

    UniProtKB/TrEMBL
    A0A093LGF2
    Conserved Domains (2) summary
    pfam13866
    Location:1 → 28
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:47 → 99
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
Nucleotide Protein
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