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POLR2J RNA polymerase II subunit J [ Nipponia nippon (crested ibis) ]

Gene ID: 104016142, updated on 3-Aug-2024

Summary

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Gene symbol
POLR2J
Gene description
RNA polymerase II subunit J
Locus tag
Y956_03295
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009001615.1 (1127405..1129247)

NW_009001615.1Genomic Context describing neighboring genes Neighboring gene uroplakin 3B like 1 Neighboring gene RAS p21 protein activator 4 Neighboring gene leucine rich repeats and WD repeat domain containing 1 Neighboring gene alkB homolog 4, lysine demethylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009001615.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase II subunit RPB11-a
Names
polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009001615.1 Reference ASM70822v1 Primary Assembly

    Range
    1127405..1129247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009468969.1 → XP_009467244.1  DNA-directed RNA polymerase II subunit RPB11-a

    UniProtKB/TrEMBL
    A0A091VD31
    Conserved Domains (1) summary
    cd06926
    Location:8 → 94
    RNAP_II_RPB11; RPB11 subunit of Eukaryotic RNA polymerase II
Nucleotide Protein
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