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KRR1 KRR1 small subunit processome component homolog [ Nipponia nippon (crested ibis) ]

Gene ID: 104010985, updated on 3-Aug-2024

Summary

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Gene symbol
KRR1
Gene description
KRR1 small subunit processome component homolog
Locus tag
Y956_11107
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008999794.1 (3434091..3439556)

NW_008999794.1Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 10 Neighboring gene nucleosome assembly protein 1 like 1 Neighboring gene glioma pathogenesis-related protein 1-like Neighboring gene glioma pathogenesis-related protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008999794.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KRR1 small subunit processome component homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008999794.1 Reference ASM70822v1 Primary Assembly

    Range
    3434091..3439556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009463183.1 → XP_009461458.1  KRR1 small subunit processome component homolog

    Conserved Domains (2) summary
    COG1094
    Location:1 → 117
    Krr1; rRNA processing protein Krr1/Pno1, contains KH domain [Translation, ribosomal structure and biogenesis]
    cl00098
    Location:64 → 90
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
Nucleotide Protein
Heading Accession and Version

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