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EVI5 ecotropic viral integration site 5 [ Serinus canaria (Common canary) ]

Gene ID: 103814892, updated on 12-Aug-2024

Summary

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Gene symbol
EVI5
Gene description
ecotropic viral integration site 5
See related
EnsemblRapid:ENSSCAG00000013876
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 8 NC_066322.1 (16483632..16554000, complement)

Chromosome 8 - NC_066322.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II associated protein 2 Neighboring gene growth factor independent 1 transcriptional repressor Neighboring gene small nucleolar RNA SNORD21 Neighboring gene ribosomal protein L5 Neighboring gene divergent protein kinase domain 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066322.1 Chromosome 8 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ecotropic viral integration site 5 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066322.1 Reference serCan2020 Primary Assembly

    Range
    16483632..16554000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030226435.2 → XP_030082295.1  ecotropic viral integration site 5 protein homolog isoform X3

    Conserved Domains (3) summary
    smart00164
    Location:116 → 324
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:352 → 666
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam08317
    Location:626 → 731
    Spc7; Spc7 kinetochore protein

  2. XM_030226442.2 → XP_030082302.1  ecotropic viral integration site 5 protein homolog isoform X3

    Related
    ENSSCAP00000019218.2, ENSSCAT00000021467.2
    Conserved Domains (3) summary
    smart00164
    Location:116 → 324
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:352 → 666
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam08317
    Location:626 → 731
    Spc7; Spc7 kinetochore protein

  3. XM_030226439.2 → XP_030082299.1  ecotropic viral integration site 5 protein homolog isoform X7

    UniProtKB/TrEMBL
    A0A8C9NIQ2
    Conserved Domains (2) summary
    smart00164
    Location:146 → 354
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:392 → 683
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  4. XM_030226437.2 → XP_030082297.1  ecotropic viral integration site 5 protein homolog isoform X5

    UniProtKB/TrEMBL
    A0A8C9NJK6
    Related
    ENSSCAP00000019226.1, ENSSCAT00000021475.2
    Conserved Domains (2) summary
    smart00164
    Location:146 → 354
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:392 → 701
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  5. XM_050977367.1 → XP_050833324.1  ecotropic viral integration site 5 protein homolog isoform X4

  6. XM_050977365.1 → XP_050833322.1  ecotropic viral integration site 5 protein homolog isoform X2

  7. XM_030226434.2 → XP_030082294.1  ecotropic viral integration site 5 protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C9NG18
    Related
    ENSSCAP00000019239.2, ENSSCAT00000021488.2
    Conserved Domains (3) summary
    smart00164
    Location:146 → 354
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:382 → 696
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam08317
    Location:656 → 761
    Spc7; Spc7 kinetochore protein

  8. XM_030226438.2 → XP_030082298.1  ecotropic viral integration site 5 protein homolog isoform X6

    UniProtKB/TrEMBL
    A0A8C9NLI5
    Related
    ENSSCAP00000019248.2, ENSSCAT00000021497.2
    Conserved Domains (3) summary
    smart00164
    Location:71 → 279
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:307 → 621
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam08317
    Location:581 → 686
    Spc7; Spc7 kinetochore protein
Nucleotide Protein
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