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AGTPBP1 ATP/GTP binding carboxypeptidase 1 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103767107, updated on 3-Aug-2024

Summary

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Gene symbol
AGTPBP1
Gene description
ATP/GTP binding carboxypeptidase 1
Locus tag
N305_03680
See related
Ensembl:ENSMVIG00005009960
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021940612.1 (5481238..5538573, complement)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017220151.1 (5755840..5813178, complement)

NW_021940612.1Genomic Context describing neighboring genes Neighboring gene neurotrophic receptor tyrosine kinase 2 Neighboring gene uncharacterized LOC108641091 Neighboring gene uncharacterized LOC108641088 Neighboring gene N-alpha-acetyltransferase 35, NatC auxiliary subunit Neighboring gene golgi membrane protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C-terminal protein deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein side chain deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic carboxypeptidase 1
Names
ATP/GTP binding protein 1
Cytosolic carboxypeptidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021940612.1 Reference ASM171598v3

    Range
    5481238..5538573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008934196.3 → XP_008932444.1  cytosolic carboxypeptidase 1 isoform X1

    Related
    ENSMVIP00005013773.1
    Conserved Domains (1) summary
    cd06906
    Location:861 → 1138
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases

  2. XM_018080937.1 → XP_017936426.1  cytosolic carboxypeptidase 1 isoform X1

    Conserved Domains (1) summary
    cd06906
    Location:861 → 1138
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases

  3. XM_018080938.1 → XP_017936427.1  cytosolic carboxypeptidase 1 isoform X1

    Conserved Domains (1) summary
    cd06906
    Location:861 → 1138
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases

  4. XM_018080939.2 → XP_017936428.1  cytosolic carboxypeptidase 1 isoform X1

    Related
    ENSMVIP00005013792.1
    Conserved Domains (1) summary
    cd06906
    Location:861 → 1138
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases

  5. XM_018080943.1 → XP_017936432.1  cytosolic carboxypeptidase 1 isoform X5

    UniProtKB/TrEMBL
    A0A093S0Q8

  6. XM_018080941.2 → XP_017936430.1  cytosolic carboxypeptidase 1 isoform X3

    UniProtKB/TrEMBL
    A0A093S0Q8

  7. XM_018080942.2 → XP_017936431.1  cytosolic carboxypeptidase 1 isoform X4

    UniProtKB/TrEMBL
    A0A093S0Q8

  8. XM_018080940.2 → XP_017936429.1  cytosolic carboxypeptidase 1 isoform X2

    UniProtKB/TrEMBL
    A0A093S0Q8

RNA

  1. XR_001921751.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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