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Itfg1 integrin alpha FG-GAP repeat containing 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103731280, updated on 11-Mar-2024

Summary

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Gene symbol
Itfg1
Gene description
integrin alpha FG-GAP repeat containing 1
See related
Ensembl:ENSNGAG00000023225
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008334892.1 (361820..519383, complement)

NW_008334892.1Genomic Context describing neighboring genes Neighboring gene neuropilin and tolloid like 2 Neighboring gene ras-related protein Rab-5A pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008334892 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell immunomodulatory protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008334892.1 Reference S.galili_v1.0 Primary Assembly

    Range
    361820..519383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008829638.3 → XP_008827860.2  T-cell immunomodulatory protein

    UniProtKB/TrEMBL
    A0A8C6RZ41
    Related
    ENSNGAP00000025194.1, ENSNGAT00000030913.1
    Conserved Domains (1) summary
    pfam13517
    Location:53 → 115
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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