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TSPAN18 tetraspanin 18 [ Ursus maritimus (polar bear) ]

Gene ID: 103672341, updated on 11-Mar-2024

Summary

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Gene symbol
TSPAN18
Gene description
tetraspanin 18
See related
Ensembl:ENSUMAG00000015509
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024424786.1 (28473200..28621274)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907185.1 (3657582..3817904, complement)

NW_024424786.1Genomic Context describing neighboring genes Neighboring gene putative heat shock protein HSP 90-beta-3 Neighboring gene CD82 molecule Neighboring gene tumor protein p53 inducible protein 11 Neighboring gene uncharacterized LOC103672337

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024424786.1 Reference ASM1731132v1 Primary Assembly

    Range
    28473200..28621274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008701046.2 → XP_008699268.1  tetraspanin-18 isoform X2

    See identical proteins and their annotated locations for XP_008699268.1

    UniProtKB/TrEMBL
    A0A384CWV4
    Conserved Domains (1) summary
    cd03156
    Location:105 → 218
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

  2. XM_008701045.2 → XP_008699267.1  tetraspanin-18 isoform X1

    UniProtKB/TrEMBL
    A0A384CWP8
    Conserved Domains (2) summary
    cd03156
    Location:149 → 262
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:66 → 291
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version

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