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UBB ubiquitin B [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103613347, updated on 3-Aug-2024

Summary

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Gene symbol
UBB
Gene description
ubiquitin B
Locus tag
N302_07742
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008237409.1 (3521041..3523698, complement)

NW_008237409.1Genomic Context describing neighboring genes Neighboring gene histone H3 associated protein kinase Neighboring gene transient receptor potential cation channel subfamily V member 2 Neighboring gene centromere protein V Neighboring gene phosphatidylinositol glycan anchor biosynthesis class L

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008237409.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tag activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyubiquitin-B
Names
Polyubiquitin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008237409.1 Reference ASM69197v1

    Range
    3521041..3523698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008631117.2 → XP_008629339.1  polyubiquitin-B isoform X3

    See identical proteins and their annotated locations for XP_008629339.1

    UniProtKB/TrEMBL
    A0A091ELH1
    Conserved Domains (1) summary
    cd01803
    Location:77 → 152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin

  2. XM_008631116.2 → XP_008629338.1  polyubiquitin-B isoform X2

    UniProtKB/TrEMBL
    A0A091ELH1
    Conserved Domains (2) summary
    cd01803
    Location:125 → 200
    Ubiquitin; Ubiquitin
    smart00213
    Location:49 → 120
    UBQ; Ubiquitin homologues

  3. XM_017731020.1 → XP_017586509.1  polyubiquitin-B isoform X1

    Conserved Domains (1) summary
    cd01803
    Location:77 → 152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin

  4. XM_017731019.1 → XP_017586508.1  polyubiquitin-B isoform X1

    Conserved Domains (1) summary
    cd01803
    Location:77 → 152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
Nucleotide Protein
Heading Accession and Version

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