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TEAD4 TEA domain transcription factor 4 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103536977, updated on 3-Aug-2024

Summary

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Gene symbol
TEAD4
Gene description
TEA domain transcription factor 4
Locus tag
N300_12040
See related
EnsemblRapid:ENSCAAG00010015481
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 1 NC_044244.1 (86793119..86851621)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007622200.1 (839268..883649)

Chromosome 1 - NC_044244.1Genomic Context describing neighboring genes Neighboring gene RAD9-HUS1-RAD1 interacting nuclear orphan 1 Neighboring gene TUB like protein 3 Neighboring gene uncharacterized LOC115598318 Neighboring gene tetraspanin 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional enhancer factor TEF-3
Names
Transcriptional enhancer factor TEF-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044244.1 Reference bCalAnn1_v1.p

    Range
    86793119..86851621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008503227.2 → XP_008501449.1  transcriptional enhancer factor TEF-3 isoform X1

    UniProtKB/TrEMBL
    A0A091IKN3
    Related
    ENSCAAP00010021293.1, ENSCAAT00010022798.1
    Conserved Domains (2) summary
    pfam17725
    Location:148 → 357
    YBD; YAP binding domain
    cl02603
    Location:1 → 32
    TEA; TEA/ATTS domain family

  2. XM_030464500.1 → XP_030320360.1  transcriptional enhancer factor TEF-3 isoform X2

    Conserved Domains (2) summary
    pfam17725
    Location:148 → 310
    YBD; YAP binding domain
    cl02603
    Location:1 → 32
    TEA; TEA/ATTS domain family
Nucleotide Protein
Heading Accession and Version

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