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UBXN7 UBX domain protein 7 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103534888, updated on 3-Aug-2024

Summary

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Gene symbol
UBXN7
Gene description
UBX domain protein 7
Locus tag
N300_15894
See related
EnsemblRapid:ENSCAAG00010003027
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 9 NC_044255.1 (4804830..4826486, complement)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007621504.1 (641718..658811, complement)

Chromosome 9 - NC_044255.1Genomic Context describing neighboring genes Neighboring gene neuraminidase 4 Neighboring gene transmembrane 4 L six family member 19 Neighboring gene ring finger protein 168 Neighboring gene WD repeat domain 53

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044255.1 Reference bCalAnn1_v1.p

    Range
    4804830..4826486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030456407.1 → XP_030312267.1  UBX domain-containing protein 7 isoform X1

    UniProtKB/TrEMBL
    A0A091IFQ2
    Related
    ENSCAAP00010004274.1, ENSCAAT00010004523.1
    Conserved Domains (3) summary
    cd02958
    Location:149 → 261
    UAS; UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. ...
    cd14345
    Location:16 → 51
    UBA_UBXD7; UBA-like domain found in UBX domain-containing protein 7 (UBXD7) and similar proteins
    cd01773
    Location:412 → 487
    UBX_UBXN7; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 7 (UBXN7) and similar proteins

  2. XM_030456408.1 → XP_030312268.1  UBX domain-containing protein 7 isoform X2

    UniProtKB/TrEMBL
    A0A091IFQ2
    Related
    ENSCAAP00010004271.1, ENSCAAT00010004520.1
    Conserved Domains (3) summary
    cd02958
    Location:116 → 228
    UAS; UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. ...
    cd01773
    Location:379 → 454
    UBX_UBXN7; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 7 (UBXN7) and similar proteins
    cl21463
    Location:1 → 18
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
Heading Accession and Version

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