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TEF TEF transcription factor, PAR bZIP family member [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103275870, updated on 11-Mar-2024

Summary

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Gene symbol
TEF
Gene description
TEF transcription factor, PAR bZIP family member
See related
Ensembl:ENSTSYG00000033681
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See TEF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007259898.1 (89567..122698)

NW_007259898.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type containing 7B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007259898 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyrotroph embryonic factor
Names
TEF, PAR bZIP transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007259898.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    89567..122698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008073271.2 → XP_008071462.1  thyrotroph embryonic factor isoform X3

    UniProtKB/TrEMBL
    A0A1U7V198
    Related
    ENSTSYP00000034901.1, ENSTSYT00000035842.1
    Conserved Domains (1) summary
    cd14695
    Location:202 → 260
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain

  2. XM_008073270.2 → XP_008071461.1  thyrotroph embryonic factor isoform X2

    UniProtKB/TrEMBL
    A0A1U7UZU0
    Related
    ENSTSYP00000016241.1, ENSTSYT00000044873.1
    Conserved Domains (1) summary
    cd14695
    Location:232 → 290
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain

  3. XM_021706586.1 → XP_021562261.1  thyrotroph embryonic factor isoform X1

    UniProtKB/TrEMBL
    A0A3Q0DHK6
    Conserved Domains (1) summary
    cd14695
    Location:237 → 295
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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