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ESRP2 epithelial splicing regulatory protein 2 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103233240, updated on 11-Mar-2024

Summary

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Gene symbol
ESRP2
Gene description
epithelial splicing regulatory protein 2
See related
Ensembl:ENSCSAG00000004067
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666047.1 (21921459..21930389)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 5 NC_023646.1 (59184624..59192842)

NW_023666047.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 7 member 6 Neighboring gene phospholipase A2 group XV Neighboring gene nuclear factor of activated T cells 3 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene ubiquitin-conjugating enzyme E2 N-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epithelial splicing regulatory protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666047.1 Reference Vero_WHO_p1.0

    Range
    21921459..21930389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038007963.1 → XP_037863891.1  epithelial splicing regulatory protein 2 isoform X7

    Conserved Domains (4) summary
    PHA03247
    Location:563 → 719
    PHA03247; large tegument protein UL36; Provisional
    cd12742
    Location:472 → 552
    RRM3_ESRP1_ESRP2; RNA recognition motif 3 (RRM3) found in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:340 → 446
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_038007960.1 → XP_037863888.1  epithelial splicing regulatory protein 2 isoform X3

    Conserved Domains (3) summary
    cd12742
    Location:462 → 542
    RRM3_ESRP1_ESRP2; RNA recognition motif 3 (RRM3) found in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:330 → 436
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_007993868.2 → XP_007992059.1  epithelial splicing regulatory protein 2 isoform X2

    Conserved Domains (4) summary
    cd12507
    Location:245 → 319
    RRM1_ESRPs_Fusilli; RNA recognition motif 1 in epithelial splicing regulatory protein ESRP1, ESRP2, Drosophila RNA-binding protein Fusilli and similar proteins
    cd12742
    Location:461 → 541
    RRM3_ESRP1_ESRP2; RNA recognition motif in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:329 → 435
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_007993869.2 → XP_007992060.1  epithelial splicing regulatory protein 2 isoform X4

    Conserved Domains (4) summary
    cd12507
    Location:246 → 320
    RRM1_ESRPs_Fusilli; RNA recognition motif 1 in epithelial splicing regulatory protein ESRP1, ESRP2, Drosophila RNA-binding protein Fusilli and similar proteins
    cd12742
    Location:462 → 542
    RRM3_ESRP1_ESRP2; RNA recognition motif in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:330 → 436
    RRM_SF; RNA recognition motif (RRM) superfamily

  5. XM_038007962.1 → XP_037863890.1  epithelial splicing regulatory protein 2 isoform X6

    Conserved Domains (3) summary
    cd12742
    Location:462 → 542
    RRM3_ESRP1_ESRP2; RNA recognition motif 3 (RRM3) found in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:330 → 436
    RRM_SF; RNA recognition motif (RRM) superfamily

  6. XM_007993872.2 → XP_007992063.1  epithelial splicing regulatory protein 2 isoform X5

    See identical proteins and their annotated locations for XP_007992063.1

    Conserved Domains (2) summary
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:330 → 436
    RRM_SF; RNA recognition motif (RRM) superfamily

  7. XM_038007961.1 → XP_037863889.1  epithelial splicing regulatory protein 2 isoform X5

    Conserved Domains (2) summary
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:330 → 436
    RRM_SF; RNA recognition motif (RRM) superfamily

  8. XM_007993867.2 → XP_007992058.1  epithelial splicing regulatory protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A0D9QVN5
    Related
    ENSCSAP00000000424.1
    Conserved Domains (4) summary
    cd12507
    Location:246 → 320
    RRM1_ESRPs_Fusilli; RNA recognition motif 1 in epithelial splicing regulatory protein ESRP1, ESRP2, Drosophila RNA-binding protein Fusilli and similar proteins
    cd12742
    Location:462 → 542
    RRM3_ESRP1_ESRP2; RNA recognition motif in epithelial splicing regulatory protein ESRP1, ESRP2 and similar proteins
    cl10012
    Location:84 → 190
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
    cl17169
    Location:330 → 436
    RRM_SF; RNA recognition motif (RRM) superfamily

RNA

  1. XR_005243818.1 RNA Sequence

Nucleotide Protein
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