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ZBTB17 zinc finger and BTB domain containing 17 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103225537, updated on 11-Mar-2024

Summary

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Gene symbol
ZBTB17
Gene description
zinc finger and BTB domain containing 17
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666054.1 (19851110..19885521)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 20 NC_023661.1 (116324794..116358600)

NW_023666054.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 3B-like Neighboring gene steroid receptor associated and regulated protein Neighboring gene spen family transcriptional repressor Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC103225539

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666054.1 Reference Vero_WHO_p1.0

    Range
    19851110..19885521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007980405.2 → XP_007978596.1  zinc finger and BTB domain-containing protein 17 isoform X1

    See identical proteins and their annotated locations for XP_007978596.1

    Conserved Domains (4) summary
    COG5048
    Location:306 → 637
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:476 → 496
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:616 → 635
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18206
    Location:2 → 113
    BTB_POZ_ZBTB17_MIZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 17 (ZBTB17)

  2. XM_007980408.2 → XP_007978599.1  zinc finger and BTB domain-containing protein 17 isoform X2

    Conserved Domains (7) summary
    smart00225
    Location:25 → 109
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:306 → 637
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:476 → 496
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:616 → 635
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:306 → 328
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:14 → 109
    BTB; BTB/POZ domain
    pfam13465
    Location:320 → 344
    zf-H2C2_2; Zinc-finger double domain

  3. XM_037984995.1 → XP_037840923.1  zinc finger and BTB domain-containing protein 17 isoform X1

    Conserved Domains (4) summary
    COG5048
    Location:306 → 637
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:476 → 496
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:616 → 635
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18206
    Location:2 → 113
    BTB_POZ_ZBTB17_MIZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 17 (ZBTB17)

  4. XM_007980409.2 → XP_007978600.1  zinc finger and BTB domain-containing protein 17 isoform X3

    Conserved Domains (5) summary
    COG5048
    Location:224 → 555
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:394 → 414
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:534 → 553
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:224 → 246
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:238 → 262
    zf-H2C2_2; Zinc-finger double domain

  5. XM_007980410.2 → XP_007978601.1  zinc finger and BTB domain-containing protein 17 isoform X4

    Conserved Domains (5) summary
    COG5048
    Location:224 → 555
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:394 → 414
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:534 → 553
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:224 → 246
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:238 → 262
    zf-H2C2_2; Zinc-finger double domain

  6. XM_007980406.2 → XP_007978597.1  zinc finger and BTB domain-containing protein 17 isoform X1

    See identical proteins and their annotated locations for XP_007978597.1

    Conserved Domains (4) summary
    COG5048
    Location:306 → 637
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:476 → 496
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:616 → 635
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18206
    Location:2 → 113
    BTB_POZ_ZBTB17_MIZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 17 (ZBTB17)
Nucleotide Protein
Heading Accession and Version

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