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VPS25 vacuolar protein sorting 25 homolog [ Orycteropus afer afer ]

Gene ID: 103211764, updated on 11-Mar-2024

Summary

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Gene symbol
VPS25
Gene description
vacuolar protein sorting 25 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006922373.1 (436649..440769, complement)

NW_006922373.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 3 homolog, mitochondrial Neighboring gene WNK lysine deficient protein kinase 4 Neighboring gene receptor activity modifying protein 2 Neighboring gene enhancer of zeste 1 polycomb repressive complex 2 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006922373 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein-sorting-associated protein 25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006922373.1 Reference OryAfe1.0 Primary Assembly

    Range
    436649..440769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007957743.2 → XP_007955934.1  vacuolar protein-sorting-associated protein 25

    UniProtKB/TrEMBL
    A0A8B7B7K1
    Conserved Domains (1) summary
    pfam05871
    Location:10 → 145
    ESCRT-II; ESCRT-II complex subunit
Nucleotide Protein
Heading Accession and Version

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