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ADAR adenosine deaminase RNA specific [ Orycteropus afer afer ]

Gene ID: 103203557, updated on 11-Mar-2024

Summary

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Gene symbol
ADAR
Gene description
adenosine deaminase RNA specific
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921804.1 (3605909..3637018)

NW_006921804.1Genomic Context describing neighboring genes Neighboring gene potassium calcium-activated channel subfamily N member 3 Neighboring gene U6 spliceosomal RNA Neighboring gene cholinergic receptor nicotinic beta 2 subunit Neighboring gene ubiquitin conjugating enzyme E2 Q1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921804 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA-specific adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
double-stranded RNA-specific adenosine deaminase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921804.1 Reference OryAfe1.0 Primary Assembly

    Range
    3605909..3637018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042782005.1 → XP_042637939.1  double-stranded RNA-specific adenosine deaminase

    UniProtKB/TrEMBL
    A0A8B7AFR8
    Conserved Domains (6) summary
    smart00552
    Location:759 → 1142
    ADEAMc; tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)
    pfam02295
    Location:130 → 195
    z-alpha; Adenosine deaminase z-alpha domain
    cl02659
    Location:242 → 305
    z-alpha; Adenosine deaminase z-alpha domain
    cd19913
    Location:448 → 518
    DSRM_DRADA_rpt1; first double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA)
    cd19915
    Location:671 → 741
    DSRM_DRADA_rpt3; third double-stranded RNA binding motif of double-stranded RNA-specific adenosine deaminase (DRADA) and similar proteins
    cl00054
    Location:559 → 629
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily
Nucleotide Protein
Heading Accession and Version

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