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ARHGEF39 Rho guanine nucleotide exchange factor 39 [ Orycteropus afer afer ]

Gene ID: 103202187, updated on 11-Mar-2024

Summary

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Gene symbol
ARHGEF39
Gene description
Rho guanine nucleotide exchange factor 39
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921761.1 (3562681..3566417)

NW_006921761.1Genomic Context describing neighboring genes Neighboring gene tropomyosin 2 Neighboring gene carbonic anhydrase 9 Neighboring gene coiled-coil domain containing 107 Neighboring gene signaling threshold regulating transmembrane adaptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921761 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho guanine nucleotide exchange factor 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921761.1 Reference OryAfe1.0 Primary Assembly

    Range
    3562681..3566417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007947017.2 → XP_007945208.1  rho guanine nucleotide exchange factor 39

    UniProtKB/TrEMBL
    A0A8B7AB52
    Conserved Domains (4) summary
    smart00233
    Location:228 → 330
    PH; Pleckstrin homology domain
    pfam00169
    Location:230 → 330
    PH; PH domain
    cl02571
    Location:27 → 195
    RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
    cl17171
    Location:199 → 255
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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