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PRKCD protein kinase C delta [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103116302, updated on 11-Mar-2024

Summary

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Gene symbol
PRKCD
Gene description
protein kinase C delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 12 NC_080173.1 (38119158..38152120, complement)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804214.1 (197729..226330, complement)

Chromosome 12 - NC_080173.1Genomic Context describing neighboring genes Neighboring gene ERV-BabFcenv provirus ancestral Env polyprotein-like Neighboring gene U2 spliceosomal RNA Neighboring gene transketolase Neighboring gene RFT1 homolog Neighboring gene phosphatidylinositol glycan anchor biosynthesis class L Neighboring gene uncharacterized LOC132541886

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diacylglycerol-dependent serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C delta type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080173.1 Reference mEriEur2.1

    Range
    38119158..38152120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016189607.2 → XP_016045093.1  protein kinase C delta type

    UniProtKB/TrEMBL
    A0A1S3WFC9
    Conserved Domains (3) summary
    smart00220
    Location:346 → 600
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    pfam00130
    Location:231 → 283
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    cl21453
    Location:350 → 665
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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