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MED16 mediator complex subunit 16 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103115045, updated on 11-Mar-2024

Summary

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Gene symbol
MED16
Gene description
mediator complex subunit 16
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 23 NC_080184.1 (340521..348341, complement)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804178.1 (284645..292576, complement)

Chromosome 23 - NC_080184.1Genomic Context describing neighboring genes Neighboring gene elastase, neutrophil expressed Neighboring gene complement factor D Neighboring gene U6 spliceosomal RNA Neighboring gene R3H domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080184.1 Reference mEriEur2.1

    Range
    340521..348341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007524792.3 → XP_007524854.1  mediator of RNA polymerase II transcription subunit 16

    UniProtKB/TrEMBL
    A0A1S2ZUS0
    Conserved Domains (4) summary
    smart00320
    Location:58 → 97
    WD40; WD40 repeats
    COG2319
    Location:49 → 134
    WD40; WD40 repeat [General function prediction only]
    pfam11635
    Location:107 → 822
    Med16; Mediator complex subunit 16
    sd00039
    Location:73 → 111
    7WD40; WD40 repeat [structural motif]

  2. XM_060181450.1 → XP_060037433.1  mediator of RNA polymerase II transcription subunit 16

    UniProtKB/TrEMBL
    A0A1S2ZUS0

  3. XM_060181449.1 → XP_060037432.1  mediator of RNA polymerase II transcription subunit 16

    UniProtKB/TrEMBL
    A0A1S2ZUS0

  4. XM_060181448.1 → XP_060037431.1  mediator of RNA polymerase II transcription subunit 16

    UniProtKB/TrEMBL
    A0A1S2ZUS0

  5. XM_060181447.1 → XP_060037430.1  mediator of RNA polymerase II transcription subunit 16

    UniProtKB/TrEMBL
    A0A1S2ZUS0
Nucleotide Protein
Heading Accession and Version

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