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GALNTL6 polypeptide N-acetylgalactosaminyltransferase like 6 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103071301, updated on 11-Mar-2024

Summary

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Gene symbol
GALNTL6
Gene description
polypeptide N-acetylgalactosaminyltransferase like 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006785319.1 (336798..1498973, complement)

NW_006785319.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene high mobility group box 2 Neighboring gene polypeptide N-acetylgalactosaminyltransferase-like 5 pseudogene Neighboring gene 60S ribosomal protein L21-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006785319 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006785319.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    336798..1498973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007457365.1 → XP_007457427.1  polypeptide N-acetylgalactosaminyltransferase-like 6

    UniProtKB/TrEMBL
    A0A340XBH8
    Conserved Domains (4) summary
    cd02510
    Location:143 → 438
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:456 → 584
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:454 → 582
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam10111
    Location:143 → 405
    Glyco_tranf_2_2; Glycosyltransferase like family 2
Nucleotide Protein
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