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STX12 syntaxin 12 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103019075, updated on 11-Mar-2024

Summary

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Gene symbol
STX12
Gene description
syntaxin 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See STX12 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 1 NC_080064.1 (21956770..21991641)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006725676.1 (919928..954320)

Chromosome 1 - NC_080064.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130705079 Neighboring gene glycine cleavage system H protein, mitochondrial-like Neighboring gene small Cajal body-specific RNA 1 Neighboring gene protein phosphatase 1 regulatory subunit 8 Neighboring gene thymocyte selection associated family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080064.1 Reference mBalAcu1.1

    Range
    21956770..21991641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007170500.3 → XP_007170562.1  syntaxin-12

    UniProtKB/TrEMBL
    A0A383Z688
    Conserved Domains (3) summary
    cd00179
    Location:19 → 164
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
    cd15876
    Location:181 → 247
    SNARE_syntaxin12; SNARE motif of syntaxin 12
    pfam00804
    Location:26 → 213
    Syntaxin; Syntaxin
Nucleotide Protein
Heading Accession and Version

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