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SDF2L1 stromal cell derived factor 2 like 1 [ Physeter catodon (sperm whale) ]

Gene ID: 102986553, updated on 10-Mar-2024

Summary

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Gene symbol
SDF2L1
Gene description
stromal cell derived factor 2 like 1
See related
Ensembl:ENSPCTG00005013526
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 19 NC_041232.1 (2085919..2087885)
102 previous assembly ASM283717v2 (GCF_002837175.2) 19 NC_041232.1 (2085919..2087885)

Chromosome 19 - NC_041232.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 L3 Neighboring gene YdjC chitooligosaccharide deacetylase homolog Neighboring gene coiled-coil domain containing 116 Neighboring gene uncharacterized LOC114484411 Neighboring gene uncharacterized LOC114484369 Neighboring gene peptidylprolyl isomerase like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
stromal cell-derived factor 2-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041232.1 Reference ASM283717v5 Primary Assembly

    Range
    2085919..2087885
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007130616.1 → XP_007130678.1  stromal cell-derived factor 2-like protein 1

    UniProtKB/TrEMBL
    A0A2Y9FU66
    Related
    ENSPCTP00005019011.1, ENSPCTT00005020926.1
    Conserved Domains (2) summary
    smart00472
    Location:95 → 150
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    cl19745
    Location:160 → 201
    Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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