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DDX25 DEAD-box helicase 25 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102946121, updated on 10-Mar-2024

Summary

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Gene symbol
DDX25
Gene description
DEAD-box helicase 25
Locus tag
UY3_13280
See related
EnsemblRapid:ENSCMYG00015000965
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
12
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 22 NC_051262.2 (2902781..2952482)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 20 NC_051260.1 (16304100..16345009, complement)

Chromosome 22 - NC_051262.2Genomic Context describing neighboring genes Neighboring gene RNA pseudouridine synthase D4 Neighboring gene HYLS1 centriolar and ciliogenesis associated Neighboring gene pseudouridine synthase 3 Neighboring gene V-set and immunoglobulin domain containing 10 like 2 Neighboring gene cell adhesion associated, oncogene regulated

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051262.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    2902781..2952482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037882353.2 → XP_037738281.2  ATP-dependent RNA helicase DDX25 isoform X1

    Related
    ENSCMYP00015001452.1, ENSCMYT00015001811.1
    Conserved Domains (2) summary
    cd18787
    Location:311 → 447
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cl28899
    Location:79 → 307
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  2. XM_043533880.1 → XP_043389815.1  ATP-dependent RNA helicase DDX25 isoform X2

    Conserved Domains (2) summary
    cd18787
    Location:311 → 399
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cl28899
    Location:79 → 307
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  3. XM_043533881.1 → XP_043389816.1  ATP-dependent RNA helicase DDX25 isoform X3

    UniProtKB/TrEMBL
    M7BN47
    Conserved Domains (1) summary
    COG0513
    Location:1 → 294
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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