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GTF2B general transcription factor IIB [ Pteropus alecto (black flying fox) ]

Gene ID: 102885364, updated on 30-Mar-2024

Summary

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Gene symbol
GTF2B
Gene description
general transcription factor IIB
Locus tag
PAL_GLEAN10023938
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006441955.1 (32989073..33015730, complement)

NW_006441955.1Genomic Context describing neighboring genes Neighboring gene protein kinase N2 Neighboring gene 40S ribosomal protein S12 pseudogene Neighboring gene kynurenine aminotransferase 3 Neighboring gene guanylate-binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006441955 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor IIB
Names
Transcription initiation factor IIB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006441955.1 Reference ASM32557v1 Primary Assembly

    Range
    32989073..33015730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015595050.2 → XP_015450536.1  transcription initiation factor IIB isoform X1

    Conserved Domains (1) summary
    COG1405
    Location:26 → 302
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]

  2. XM_006919386.3 → XP_006919448.1  transcription initiation factor IIB isoform X2

    See identical proteins and their annotated locations for XP_006919448.1

    UniProtKB/TrEMBL
    L5K438
    Conserved Domains (1) summary
    COG1405
    Location:14 → 290
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
Nucleotide Protein
Heading Accession and Version

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