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DDR1 discoidin domain receptor tyrosine kinase 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102883149, updated on 11-Apr-2024

Summary

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Gene symbol
DDR1
Gene description
discoidin domain receptor tyrosine kinase 1
Locus tag
PAL_GLEAN10001346
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006436809.1 (654116..667870)

NW_006436809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112481222 Neighboring gene 5S ribosomal RNA Neighboring gene general transcription factor IIH subunit 4 Neighboring gene valyl-tRNA synthetase 2, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006436809 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase collagen receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epithelial discoidin domain-containing receptor 1
Names
Epithelial discoidin domain-containing receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006436809.1 Reference ASM32557v1 Primary Assembly

    Range
    654116..667870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006913671.3 → XP_006913733.1  epithelial discoidin domain-containing receptor 1 isoform X1

    See identical proteins and their annotated locations for XP_006913733.1

    UniProtKB/TrEMBL
    L5KHM3
    Conserved Domains (2) summary
    cd05096
    Location:608 → 911
    PTKc_DDR1; Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1
    cd00057
    Location:34 → 185
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

  2. XM_015590764.2 → XP_015446250.1  epithelial discoidin domain-containing receptor 1 isoform X2

    UniProtKB/TrEMBL
    L5KHM3
    Conserved Domains (2) summary
    cd05096
    Location:571 → 874
    PTKc_DDR1; Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1
    cd00057
    Location:34 → 185
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

RNA

  1. XR_001517060.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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