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PUM2 pumilio RNA binding family member 2 [ Pteropus alecto (black flying fox) ]

Gene ID: 102881371, updated on 30-Mar-2024

Summary

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Gene symbol
PUM2
Gene description
pumilio RNA binding family member 2
Locus tag
PAL_GLEAN10020183
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See PUM2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006434835.1 (11378852..11457873, complement)

NW_006434835.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S8 pseudogene Neighboring gene syndecan 1 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene b(0,+)-type amino acid transporter 1-like Neighboring gene ras homolog family member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006434835 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pumilio homolog 2
Names
Pumilio like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006434835.1 Reference ASM32557v1 Primary Assembly

    Range
    11378852..11457873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025045803.1 → XP_024901571.1  pumilio homolog 2 isoform X4

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:641 → 962
    Pumilio; Pumilio-family RNA binding domain

  2. XM_025045800.1 → XP_024901568.1  pumilio homolog 2 isoform X2

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:720 → 1041
    Pumilio; Pumilio-family RNA binding domain

  3. XM_006910260.3 → XP_006910322.1  pumilio homolog 2 isoform X1

    See identical proteins and their annotated locations for XP_006910322.1

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:720 → 1043
    Pumilio; Pumilio-family RNA binding domain

  4. XM_006910263.3 → XP_006910325.1  pumilio homolog 2 isoform X4

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:641 → 962
    Pumilio; Pumilio-family RNA binding domain

  5. XM_006910261.3 → XP_006910323.1  pumilio homolog 2 isoform X2

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:720 → 1041
    Pumilio; Pumilio-family RNA binding domain

  6. XM_025045806.1 → XP_024901574.1  pumilio homolog 2 isoform X7

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:585 → 906
    Pumilio; Pumilio-family RNA binding domain

  7. XM_025045804.1 → XP_024901572.1  pumilio homolog 2 isoform X4

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:641 → 962
    Pumilio; Pumilio-family RNA binding domain

  8. XM_025045802.1 → XP_024901570.1  pumilio homolog 2 isoform X3

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:641 → 964
    Pumilio; Pumilio-family RNA binding domain

  9. XM_025045801.1 → XP_024901569.1  pumilio homolog 2 isoform X2

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:720 → 1041
    Pumilio; Pumilio-family RNA binding domain

  10. XM_025045798.1 → XP_024901566.1  pumilio homolog 2 isoform X1

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:720 → 1043
    Pumilio; Pumilio-family RNA binding domain

  11. XM_015588163.2 → XP_015443649.1  pumilio homolog 2 isoform X6

    Conserved Domains (1) summary
    cd07920
    Location:587 → 910
    Pumilio; Pumilio-family RNA binding domain

  12. XM_025045805.1 → XP_024901573.1  pumilio homolog 2 isoform X5

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:629 → 952
    Pumilio; Pumilio-family RNA binding domain

  13. XM_006910262.3 → XP_006910324.1  pumilio homolog 2 isoform X3

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:641 → 964
    Pumilio; Pumilio-family RNA binding domain

  14. XM_006910257.3 → XP_006910319.1  pumilio homolog 2 isoform X1

    See identical proteins and their annotated locations for XP_006910319.1

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:720 → 1043
    Pumilio; Pumilio-family RNA binding domain

  15. XM_025045799.1 → XP_024901567.1  pumilio homolog 2 isoform X1

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:720 → 1043
    Pumilio; Pumilio-family RNA binding domain

  16. XM_015588165.2 → XP_015443651.1  pumilio homolog 2 isoform X8

    UniProtKB/TrEMBL
    L5KT88
    Conserved Domains (1) summary
    cd07920
    Location:664 → 987
    Pumilio; Pumilio-family RNA binding domain
Nucleotide Protein
Heading Accession and Version

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