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ZFX zinc finger protein X-linked [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102852333, updated on 10-Mar-2024

Summary

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Gene symbol
ZFX
Gene description
zinc finger protein X-linked
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399790.1 (1573211..1598891)

NW_006399790.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 15 Neighboring gene eukaryotic translation initiation factor 2 subunit gamma Neighboring gene myosin regulatory light chain 12B-like Neighboring gene transcription factor SPT20 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399790 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger X-chromosomal protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399790.1 Reference EleEdw1.0

    Range
    1573211..1598891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006885038.1 → XP_006885100.1  zinc finger X-chromosomal protein

    Conserved Domains (6) summary
    COG5048
    Location:538 → 675
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:543 → 565
    zf-C2H2; Zinc finger, C2H2 type
    pfam04704
    Location:71 → 405
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    pfam13465
    Location:557 → 579
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:372 → 452
    ROS_MUCR; ROS/MUCR transcriptional regulator protein
Nucleotide Protein
Heading Accession and Version

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