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ZNF148 zinc finger protein 148 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102847149, updated on 10-Mar-2024

Summary

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Gene symbol
ZNF148
Gene description
zinc finger protein 148
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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See ZNF148 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399782.1 (4243519..4462371)

NW_006399782.1Genomic Context describing neighboring genes Neighboring gene prefoldin subunit 4-like Neighboring gene 60S ribosomal protein L34-like Neighboring gene phosphodiesterase 9A pseudogene Neighboring gene solute carrier family 12 member 8 Neighboring gene S-phase kinase-associated protein 1-like Neighboring gene heart development protein with EGF like domains 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399782 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 148

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399782.1 Reference EleEdw1.0

    Range
    4243519..4462371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006884210.1 → XP_006884272.1  zinc finger protein 148

    See identical proteins and their annotated locations for XP_006884272.1

    Conserved Domains (4) summary
    COG5048
    Location:224 → 281
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:172 → 192
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:170 → 192
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:213 → 237
    zf-H2C2_2; Zinc-finger double domain

  2. XM_006884211.1 → XP_006884273.1  zinc finger protein 148

    See identical proteins and their annotated locations for XP_006884273.1

    Conserved Domains (4) summary
    COG5048
    Location:224 → 281
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:172 → 192
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:170 → 192
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:213 → 237
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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